BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038D05SP1|AL430531
(440 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1670 804 0.0
>3x_Contig1670
Length = 9382
Score = 804 bits (405), Expect = 0.0
Identities = 422/426 (99%), Gaps = 3/426 (0%)
Strand = Plus / Minus
Query: 1 agacaagggacttgatttcagaccatgcataattttttgccgataagattattttcgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5726 agacaagggacttgatttcagaccatgcataattttttgccgataagattattttcgatg 5667
Query: 61 ataatattagatactagcaaaagtagaagattagcacagctaagaaagtttttttttaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5666 ataatattagatactagcaaaagtagaagattagcacagctaagaaagtttttttttaga 5607
Query: 121 ttttatgtattcatgtacctagatatttctataaagtagaacatttgagttcacattata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5606 ttttatgtattcatgtacctagatatttctataaagtagaacatttgagttcacattata 5547
Query: 181 aaaaaacattaaccatcgaatggcatgtctctaagagagaggtatactagtaaaaagtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5546 aaaaaacattaaccatcgaatggcatgtctctaagagagaggtatactagtaaaaagtca 5487
Query: 241 actttggggagaaaccaatgatttaacgttggtagttaacctcaccaccgcttgcagatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5486 actttggggagaaaccaatgatttaacgttggtagttaacctcaccaccgcttgcagatt 5427
Query: 301 ggcagtgaatggtccgccgtttttggaccaacgaccctttccakgaatacatgggccacc 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5426 ggcagtgaatggtccgccgtttttggaccaacgaccctttccaggaatacatgggccacc 5367
Query: 361 attaccgacgcaacttggtacatctcttttcgatactaccagcgctggctagtggtcacc 420
|||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5366 attaccgacgcaac-tggtacatctcttttcgatactaccagcgctggcta--ggtcacc 5310
Query: 421 agtgct 426
||||||
Sbjct: 5309 agtgct 5304
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3246
Number of Sequences: 1807
Number of extensions: 3246
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 440
length of database: 10,358,551
effective HSP length: 16
effective length of query: 424
effective length of database: 10,329,639
effective search space: 4379766936
effective search space used: 4379766936
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)